Merge remote-tracking branch 'public-gh/master' into paperclip-routines

* public-gh/master: (46 commits)
  chore(lockfile): refresh pnpm-lock.yaml (#1377)
  fix: manage codex home per company by default
  Ensure agent home directories exist before use
  Handle directory entries in imported zip archives
  Fix portability import and org chart test blockers
  Fix PR verify failures after merge
  fix: address greptile follow-up feedback
  Address remaining Greptile portability feedback
  docs: clarify quickstart npx usage
  Add guarded dev restart handling
  Fix PAP-576 settings toggles and transcript default
  Add username log censor setting
  fix: use standard toggle component for permission controls
  fix: add missing setPrincipalPermission mock in portability tests
  fix: use fixed 1280x640 dimensions for org chart export image
  Adjust default CEO onboarding task copy
  fix: link Agent Company to agentcompanies.io in export README
  fix: strip agents and projects sections from COMPANY.md export body
  fix: default company export page to README.md instead of first file
  Add default agent instructions bundle
  ...

# Conflicts:
#	packages/adapters/pi-local/src/server/execute.ts
#	packages/db/src/migrations/meta/0039_snapshot.json
#	packages/db/src/migrations/meta/_journal.json
#	server/src/__tests__/agent-permissions-routes.test.ts
#	server/src/__tests__/agent-skills-routes.test.ts
#	server/src/services/company-portability.ts
#	skills/paperclip/references/company-skills.md
#	ui/src/api/agents.ts

packages/shared/src/index.ts

@@ -162,6 +162,7 @@ export type {
   AgentSkillSnapshot,
   AgentSkillSyncRequest,
   InstanceExperimentalSettings,
+  InstanceGeneralSettings,
   InstanceSettings,
   Agent,
   AgentAccessState,
@@ -310,6 +311,9 @@ export type {
 } from "./types/index.js";
 
 export {
+  instanceGeneralSettingsSchema,
+  patchInstanceGeneralSettingsSchema,
+  type PatchInstanceGeneralSettings,
   instanceExperimentalSettingsSchema,
   patchInstanceExperimentalSettingsSchema,
   type PatchInstanceExperimentalSettings,